BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008E08SP1|AL425879
(796 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1207 1578 0.0
>3x_Contig1207
Length = 6451
Score = 1578 bits (796), Expect = 0.0
Identities = 796/796 (100%)
Strand = Plus / Plus
Query: 1 atcgaaaaatcttgatactctacttggcggagggatagaaaccggatctatcactgaact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3522 atcgaaaaatcttgatactctacttggcggagggatagaaaccggatctatcactgaact 3581
Query: 61 gtttggtgagtttagaactggtaaatcgcaactttgccatacattggctgtcacatgcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3582 gtttggtgagtttagaactggtaaatcgcaactttgccatacattggctgtcacatgcca 3641
Query: 121 gatacctttggatatgggaggcggtgaaggcaagtgtttgtacattgatacggagggtac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3642 gatacctttggatatgggaggcggtgaaggcaagtgtttgtacattgatacggagggtac 3701
Query: 181 attcagaccgattaggttggtttcgattgcgcagaggttcggtttggaccctgacgatgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3702 attcagaccgattaggttggtttcgattgcgcagaggttcggtttggaccctgacgatgc 3761
Query: 241 tttaaataacgttgcatatgcaagagcttataacgcagaccatcaattgaaattgttgga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3762 tttaaataacgttgcatatgcaagagcttataacgcagaccatcaattgaaattgttgga 3821
Query: 301 cgcagctgcacagatgatgagtgagtcaagattttcgctgattattgtcgattctattat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3822 cgcagctgcacagatgatgagtgagtcaagattttcgctgattattgtcgattctattat 3881
Query: 361 ggcattgtacagaaccgacttctcgggacgtggtgagttaagtgcaagacagatgcacct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3882 ggcattgtacagaaccgacttctcgggacgtggtgagttaagtgcaagacagatgcacct 3941
Query: 421 tgccaagttcatgagatcattacaaagactagctgatcagtttggtgtcgcagcggtagt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3942 tgccaagttcatgagatcattacaaagactagctgatcagtttggtgtcgcagcggtagt 4001
Query: 481 gacaaatcaggttgtggcccaagttgacggaggaatgatgtttaaccctgatccaaaaaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4002 gacaaatcaggttgtggcccaagttgacggaggaatgatgtttaaccctgatccaaaaaa 4061
Query: 541 accgattggtggtaatatcatggctcattcctccactactcgtcttggattcaagaaggg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4062 accgattggtggtaatatcatggctcattcctccactactcgtcttggattcaagaaggg 4121
Query: 601 gaaaggtccacagagatactgtaaagtggtagactcaccatgtttgcctgaagcagaatg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4122 gaaaggtccacagagatactgtaaagtggtagactcaccatgtttgcctgaagcagaatg 4181
Query: 661 tgtgtttgcgatctacgaggatggtatcggagatccaagggaagacgatgattgatctga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4182 tgtgtttgcgatctacgaggatggtatcggagatccaagggaagacgatgattgatctga 4241
Query: 721 ttctctttacctggttattcataacaccaaaaaaaaaagaataaaaagaaaaatccacat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4242 ttctctttacctggttattcataacaccaaaaaaaaaagaataaaaagaaaaatccacat 4301
Query: 781 ttttaatatagcattc 796
||||||||||||||||
Sbjct: 4302 ttttaatatagcattc 4317
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6653
Number of Sequences: 1807
Number of extensions: 6653
Number of successful extensions: 98
Number of sequences better than 1.0e-20: 1
length of query: 796
length of database: 10,358,551
effective HSP length: 16
effective length of query: 780
effective length of database: 10,329,639
effective search space: 8057118420
effective search space used: 8057118420
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)